I am a French health data science engineer working in Lille, France. My favorite languages are mathematics and Python, but I can get by with other languages. I also enjoy social exchange, particularly through learning and teaching. See my detailed curriculum vitae below.

Work Experience

Data Science Engineer. Nov. 2021 – Present (> 6 years). AQUILAB by Coexya. Loos, France.

• Conception and development of data analysis modules for a web platform managing clinical trials.
• Research projects management.

Health Data Science CIFRE Ph.D. Student. Nov. 2018 – Nov. 2021 (3 years). AQUILAB by Coexya. Loos, France.

• Medical image processing, radiomics and survival analysis.
• Radiotherapy data analysis and quality assurance.

Computer Science Research Intern. Mar. – Aug 2018 (6 months). National Institute for Research in Digital Science and Technology (INRIA) of Lille, Project-team MAchine learninG in information NETworks (MAGNET). Villeneuve-d’Ascq, France.

• Improving the robustness of the GOssip Private Averaging (GOPA) algorithm against malicious users and disconnections.

Lead Junior Python Developer. Jan. 2017 – Jan. 2018 (1 year). National Institute of Applied Sciences (INSA) of Rouen and Henri Becquerel Center. Saint-Étienne-du-Rouvray, France.

• Unicancer Innovation Award 2017: Management and Research Award
• Conception and development of a Python user interface for the segmentation of cancer patients’ CT scans.
• Automated slice localization using a Keras-implemented fully convolutional deep neural networks (FCN).
• ISO9001:2015 certified project

Data Scientist Intern. Jun. – Aug. 2017 (3 months). Vekia. Lille, France.

• Evaluation and development of a Python module for detecting suspicious inventories using machine learning algorithms.
• Development of a suspicious inventories simulator.

Production Workman Intern. Jul. 2013 (4 weeks). Ressorts Masselin. Le Petit-Quevilly, France.

• Cold springs manufacturing, quality assurance and packaging.

Diplomas and Formation

Health Data Science CIFRE Ph.D. Student. Nov. 2018 – Nov. 2021 (3 years). University of Rouen, Laboratory of Computer Science, Information Processing and Systems (LITIS), Team Quantification in Functional Imaging (QuantIF) and Henri Becquerel Center. Rouen, France.

• “Research of radiomics signatures in head-and-neck and pulmonary cancers treated with radiotherapy using machine learning.”
• I aborted my Ph.D. studies due to health issues at the beginning of my 4^th year.</em>

Master 2 Data Science. Sep. 2017 – Sep. 2018 (1 year). National Institute of Applied Sciences (INSA) of Rouen and University of Rouen. Saint-Étienne-du-Rouvray, France.

• Dual-degree paired with my engineer’s degree.

Computer Science Engineer’s Degree, Spe. Data Engineering. Sep. 2014 – Sep. 2018 (4 years). National Institute of Applied Sciences (INSA) of Rouen, Dept. Information Systems Architectures (ASI). Saint-Étienne-du-Rouvray, France.

Undergraduate General Engineering, Spe. Computer Science and Mathematics. Sep. 2012 – Jun. 2014 (2 years). National Institute of Applied Sciences (INSA) of Rouen, Dept. Engineering Sciences and Techniques (STPI). Saint-Étienne-du-Rouvray, France.

French Baccalaureate of Sciences, Spe. Earth and Life Sciences. Jul. 2012. French School Abroad Montaigne. Cotonou, Benin.

• Magna Cum Laude

Publications

  0000-0002-5725-7910

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  2024 (2)

CT enhancement for individual case reviews in RT quality assurance. Özer, Ö., Huat, A., Gibon, D., & Thariat, J. Journée annuelle de l’axe 3 du Cancéropôle Nord-Ouest (CNO) : Imagerie et adaptation thérapeutique, December 2024.
link   bibtex  

@misc{Ozgur2024CTEnhanceResearch,
  title = "CT enhancement for individual case reviews in RT quality assurance",
  author = "Özer, Özgür and Huat, Alexandre and Gibon, David and Thariat, Juliette",
  howpublished = "Journée annuelle de l’axe 3 du Cancéropôle Nord-Ouest (CNO) : Imagerie et adaptation thérapeutique",
  year = 2024,
  month = dec,
  address = "Rouen, France",
  type = "Oral communication",
}

State-of-the-art of CT enhancement methods for RT planning: a review. Özer, Ö., Huat, A., Gibon, D., & Thariat, J. In International Conference on the use of Computers in Radiation therapy (ICCR), Lyon, France, July 2024.
Paper   link   bibtex   1 download  

@inproceedings{Ozgur2024CTEnhanceReview,
  title = "State-of-the-art of CT enhancement methods for RT planning: a review",
  author = "Özer, Özgür and Huat, Alexandre and Gibon, David and Thariat, Juliette",
  booktitle = "International Conference on the use of Computers in Radiation therapy (ICCR)",
  eid = 526015,
  year = 2024,
  month = jul,
  address = "Lyon, France",
  url = "https://www.iccr2024.org/papers/526015.pdf",
}

  2023 (1)

Evaluating and updating predictive models: a high-tech open platform to boost clinical translation. Huat, A., Franco, N. R., Chang-Claude, J., Cicchetti, A., Gutiérrez-Enríquez, S., Seibold, P., Talbot, C., Vega, A., Gibon, D., Zunino, P., & Rancati, T. In Radiotherapy and Oncology, volume 182 Supplement 1, pages S1897–S1899, Vienna, Austria, May 2023.
Paper   doi   link   bibtex  

@inproceedings{Huat2023ONP,
  title = "Evaluating and updating predictive models: a high-tech open platform to boost clinical translation",
  author = "Huat, Alexandre and Franco, Nicola Rares and Chang-Claude, Jenny and Cicchetti, Alessandro and Gutiérrez-Enríquez, Sara and Seibold, Petra and Talbot, Chris and Vega, Ana and Gibon, David and Zunino, Paolo and Rancati, Tiziana",
  booktitle = "Radiotherapy and Oncology",
  volume = "182 Supplement 1",
  pages = "S1897--S1899",
  eid = "PO-2113",
  year = 2023,
  month = may,
  address = "Vienna, Austria",
  doi = "10.1016/S0167-8140(23)67028-8",
  url = "https://user-swndwmf.cld.bz/ESTRO-2023-Abstract-Book1/1910",
  type = "Poster",
}

  2022 (3)

ERA PerMed 2018: RADprecise. Aguado, E., Cicchetti, A., Franco, N. R., Giosco, E., Heumann, P., Huat, A., La Rocca, E., López, C., Mapelli, A., Massi, M., Pérez, C., Ward, T., & De Fino, F. November 2022. Winner of the video competition 'The story behind our personalised medicine research project'
Paper   link   bibtex   2 downloads  

@misc{RADp2022Video,
  title = "ERA PerMed 2018: RADprecise",
  author = "Aguado, Ester and Cicchetti, Alessandro and Franco, Nicola Rares and Giosco, Eliana and Heumann, Philipp and Huat, Alexandre and {La Rocca}, Eliana and López, Carlos and Mapelli, Alessia and Massi, Michela and Pérez, Carlos and Ward, Tim and {De Fino}, Fabio",
  year = 2022,
  month = nov,
  note = "Winner of the video competition 'The story behind our personalised medicine research project'",
  url = "https://youtu.be/yR9LXra8Wz8",
  publisher = "YouTube",
  type = "Video",
}

Deep learning based radiomics to predict treatment response using multi-datasets. Brochet, T., Lapuyade-Lahorgue, J., Huat, A., Thureau, S., Pasquier, D., Gardin, I., Modzelewski, R., Gibon, D., Thariat, J., Grégoire, V., Vera, P., & Ruan, S. In Medical Imaging and Computer-Aided Diagnosis (MICAD), pages 431–440, Singapore, November 2022.
doi   link   bibtex  

@inproceedings{Brochet2022Radiomic,
  title = "Deep learning based radiomics to predict treatment response using multi-datasets",
  author = "Brochet, Thibaud and Lapuyade-Lahorgue, Jérome and Huat, Alexandre and Thureau, Sébastien and Pasquier, David and Gardin, Isabelle and Modzelewski, Romain and Gibon, David and Thariat, Juliette and Grégoire, Vincent and Vera, Pierre and Ruan, Su",
  booktitle = "Medical Imaging and Computer-Aided Diagnosis (MICAD)",
  pages = "431--440",
  year = 2022,
  month = nov,
  address = "Singapore",
  doi = "10.1007/978-981-16-6775-6_35",
}

A Quantitative Comparison between Shannon and Tsallis–Havrda–Charvat Entropies Applied to Cancer Outcome Prediction. Brochet, T., Lapuyade-Lahorgue, J., Huat, A., Thureau, S., Pasquier, D., Gardin, I., Modzelewski, R., Gibon, D., Thariat, J., Grégoire, V., Vera, P., & Ruan, S. Entropy, 24(4). March 2022.
doi   link   bibtex  

@article{Brochet2022Entropy,
  title = "A Quantitative Comparison between Shannon and Tsallis–Havrda–Charvat Entropies Applied to Cancer Outcome Prediction",
  author = "Brochet, Thibaud and Lapuyade-Lahorgue, Jérôme and Huat, Alexandre and Thureau, Sébastien and Pasquier, David and Gardin, Isabelle and Modzelewski, Romain and Gibon, David and Thariat, Juliette and Grégoire, Vincent and Vera, Pierre and Ruan, Su",
  journal = "Entropy",
  volume = 24,
  number = 4,
  eid = 436,
  year = 2022,
  month = mar,
  doi = "10.3390/e24040436",
}

  2020 (2)

Apport des données cliniques de PRPO dans la régression de la survie aux cancers ORL. Huat, A., Thureau, S., Modzelewski, R., Thariat, J., Grégoire, V., Pasquier, D., Vera, P., Gibon, D., & Gardin, I. Réunion de l'axe 3 du Cancéropôle Nord-Ouest (CNO) : Place de l'imagerie médicale dans la précision thérapeutique, December 2020.
link   bibtex  

@misc{Huat2020PRPO,
  author = "Huat, Alexandre and Thureau, Sébastien and Modzelewski, Romain and Thariat, Juliette and Grégoire, Vincent and Pasquier, David and Vera, Pierre and Gibon, David and Gardin, Isabelle",
  title = "Apport des données cliniques de PRPO dans la régression de la survie aux cancers ORL",
  howpublished = "Réunion de l'axe 3 du Cancéropôle Nord-Ouest (CNO) : Place de l'imagerie médicale dans la précision thérapeutique",
  year = 2020,
  month = dec,
  address = "Online",
  type = "Oral communication",
}

Breaking down misconceptions on screening tests in the era of COVID-19. Huat, A. March 2020.
Paper   link   bibtex  

@misc{Huat2020Screening,
  title = "Breaking down misconceptions on screening tests in the era of COVID-19",
  author = "Huat, Alexandre",
  year = 2020,
  month = mar,
  publisher = "Google Colab",
  url = "https://gist.github.com/alexandrehuat/f0c7854e911847ef74e79b60cbd9747c",
  type = "Jupyter notebook",
}

  2019 (1)

Constitution d'une base de données rétrospective multicentrique de cancers ORL et pulmonaires traités par radiothérapie pour la prédiction de la survie globale. Huat, A., Thureau, S., Ducornet, S., Dequeker, G., Modzelewski, R., Thariat, J., Grégoire, V., Pasquier, D., Vera, P., Gibon, D., & Gardin, I. Réunion de l'axe 3 du Cancéropôle Nord-Ouest (CNO) : Place de l'imagerie médicale dans la précision thérapeutique, December 2019.
link   bibtex  

@misc{Huat2019PRPO,
  title = "Constitution d'une base de données rétrospective multicentrique de cancers ORL et pulmonaires traités par radiothérapie pour la prédiction de la survie globale",
  author = "Huat, Alexandre and Thureau, Sébastien and Ducornet, Sandrine and Dequeker, Guénaël and Modzelewski, Romain and Thariat, Juliette and Grégoire, Vincent and Pasquier, David and Vera, Pierre and Gibon, David and Gardin, Isabelle",
  howpublished = "Réunion de l'axe 3 du Cancéropôle Nord-Ouest (CNO) : Place de l'imagerie médicale dans la précision thérapeutique",
  address = "Lille, France",
  year = 2019,
  month = dec,
  type = "Oral communication",
}

  2018 (1)

Robustness for GOssip Private Averaging (GOPA). Huat, A. Master's thesis, National Institute of Applied Sciences (INSA) of Rouen and University of Rouen, August 2018.
Paper   link   bibtex  

@mastersthesis{Huat2018GOPA,
  title = "Robustness for GOssip Private Averaging (GOPA)",
  author = "Huat, Alexandre",
  year = 2018,
  month = aug,
  school = "National Institute of Applied Sciences (INSA) of Rouen and University of Rouen",
  url = "https://github.com/alexandrehuat/alexandrehuat.github.io/blob/master/assets/pdf/Huat2018-MastersThesis-RobustGOPA.pdf",
}

Hardskills

General

• Statistics and Machine Learning
• Medical Image Processing
• Software Architecture and Development

Programming

• Python: Advanced
• PHP, HTML/Twig, CSS, JavaScript: Advanced
• SQL, Docker: Fundamental
• Bash, Zsh, Batch, PowerShell: Intermediate
• Java, C, Pascal, Prolog: Fundamental

Softskills

Personal

• Solution-oriented
• Rigorous
• Creative

Relational

• Leader
• Empathic
• Knowledge sharing

Languages

• 🇫🇷 French: Native
• 🇬🇧 English: C1–C2 level. Weekly lessons with Jake Bowles.
• 🇪🇸 Spanish: Notions
• 🇩🇪 German: Notions
• 🇲🇦 Arabic (Darija): Notions

Certifications

First Aid: Sauveteur Secouriste du Travail (SST). Feb. 2023. Formation Dupuis Management. Loos, France.

Fire Evacuation. Feb. 2023. Formation Dupuis Management. Loos, France.

Driving Licence, Category B. Jun. 2015. Rouen, France.

🇬🇧 TOEIC® Listening and Reading, Score 905. May 2017. ETS Global. Rouen, France.

Volunteer Experience

🤼 Junior Mixed Martial Arts (MMA) Instructor. Apr. 2023 – Present (> 1 year). Faubourg de Béthune Judo Club de Lille (FBJCL). Lille, France.

Academic Mentor. Apr. 2024 – Present (> 8 months). JobIRL. Lille, France.

• Mentoring and tutoring for a first-year IT student.
• Mentoring for a third-year IT student.

Private Tutor in Advanced Statistics. Oct. 2023 – Jan. 2024 (3 months). Lille, France.

• Based on Stochastic Modeling and Mathematical Statistics: A Text for Statisticians and Quantitative Scientists (Samaniego, 2014).

Academic Mentor. Oct. 2022 – Jun. 2023 (1 year). Entraide Scolaire Amicale (ESA). Lille, France.

• Mentoring and tutoring in mathematics for a final-year high school student.

Scientific and Technological Support in Primary School: Introducing robotic programming to children. Jan. – Jun. 2016 (6 months). Primary School Gérard Philipe and National Institute of Applied Sciences (INSA) of Rouen. Amfreville-la-Mi-Voie, France.

Hobbies

Martial Arts

🤼 Mixed Martial Arts (MMA): 2^nd Degree Federal Instructor, 🟢 Green Grade. Sep. 2022 – Present (> 2 years). French MMA Federation. Lille, France.

🥋 Judo and Jujutsu: 🟠 Orange Belt. Oct. 2022 – Present (> 2 years). Faubourg de Béthune Judo Club de Lille (FBJCL). Lille, France.

🥊 Muay Thai, Muay Boran and Lethwei: 🟤 Brown Armband. Sep. 2012 – Present (> 12 years). Kru Rufin Didier, Team Naja and Self-Taught. Rouen and Lille, France.

⚔️ Krabi-krabong: Intermediate level. Kru Rufin Didier and Self-Taught. Rouen and Lille, France

Sports

🤸 Handstand Walking. Mar. 2020 – Jan. 2025 (5 years). Lille, France.

• Training for a world record attempt, aborted due to too many injuries.

🤾‍♂️ Handball. Sep. 2010 – Jul. 2012 (2 years). French School Abroad Montaigne. Cotonou, Bénin.

🎾 Tennis: rank 30/2. 2002 – 2008 (6 years). France.

Music

🎸 Guitar. Sep. 2002 – Present (> 22 years).

• Classic, electric, folk.
• Blues, jazz, oriental, and a lot of improvisation.

Other

🤵 Game Animation. Jul. 2024 – Present (> 5 months).

• Organization and animation of custom editions of Who Wants to Be a Millionaire? for colleagues and friends.
• 🐙 Development of a graphical game interface using Tkinter in Python.